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  5. GSVIVT01028130001

GSVIVT01028130001


Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component


Gene families : OG0001597 (Archaeplastida) Phylogenetic Tree(s): OG0001597_tree ,
OG_05_0006556 (LandPlants) Phylogenetic Tree(s): OG_05_0006556_tree ,
OG_06_0007902 (SeedPlants) Phylogenetic Tree(s): OG_06_0007902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028130001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00165520 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
AT1G02560 NCLPP1, CLPP5, NCLPP5 nuclear encoded CLP protease 5 0.04 Archaeplastida
Cpa|evm.model.tig00021522.2 No alias ATP-dependent Clp protease proteolytic subunit 5,... 0.02 Archaeplastida
Cre12.g486100 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
Gb_02667 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.02 Archaeplastida
LOC_Os03g19510.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.08 Archaeplastida
MA_806g0010 No alias ATP-dependent Clp protease proteolytic subunit 5,... 0.04 Archaeplastida
Mp2g19280.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.06 Archaeplastida
Pp3c24_11660V3.1 No alias nuclear encoded CLP protease 5 0.04 Archaeplastida
Solyc01g100520.3.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.06 Archaeplastida
Zm00001e015198_P001 No alias ATP-dependent Clp protease proteolytic subunit 2,... 0.04 Archaeplastida
Zm00001e023057_P001 No alias ATP-dependent Clp protease proteolytic subunit 2,... 0.04 Archaeplastida
Zm00001e038326_P005 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004807 triose-phosphate isomerase activity IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
MF GO:0016851 magnesium chelatase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Neighborhood
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 97 273
No external refs found!