GSVIVT01028139001


Description : Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000235 (Archaeplastida) Phylogenetic Tree(s): OG0000235_tree ,
OG_05_0000298 (LandPlants) Phylogenetic Tree(s): OG_05_0000298_tree ,
OG_06_0002585 (SeedPlants) Phylogenetic Tree(s): OG_06_0002585_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028139001
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT1G60770 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT4G01990 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT4G02820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 Archaeplastida
Solyc11g006380.2.1 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
Zm00001e036620_P001 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 219 265
IPR002885 Pentatricopeptide_repeat 185 213
No external refs found!