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  5. GSVIVT01028204001

GSVIVT01028204001


Description : Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum


Gene families : OG0000035 (Archaeplastida) Phylogenetic Tree(s): OG0000035_tree ,
OG_05_0000162 (LandPlants) Phylogenetic Tree(s): OG_05_0000162_tree ,
OG_06_0000359 (SeedPlants) Phylogenetic Tree(s): OG_06_0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028204001
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00136650 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 Archaeplastida
AMTR_s00006p00251360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AMTR_s00045p00070890 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AMTR_s00076p00074970 evm_27.TU.AmTr_v1... Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. 0.02 Archaeplastida
AMTR_s00153p00078810 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
MA_10431300g0020 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
MA_10431493g0020 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_9388552g0010 No alias Chlorophyll a-b binding protein type 2 member 2... 0.03 Archaeplastida
MA_97315g0010 No alias component LHCb1/2/3 of LHC-II complex 0.01 Archaeplastida
Pp3c10_3020V3.1 No alias photosystem II light harvesting complex gene 2.3 0.06 Archaeplastida
Pp3c22_5610V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c2_36190V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c2_36500V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c2_36570V3.1 No alias photosystem II light harvesting complex gene 2.1 0.05 Archaeplastida
Pp3c6_12510V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Smo149722 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Smo446130 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
Smo75552 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Zm00001e020625_P001 No alias Chlorophyll a-b binding protein 48, chloroplastic OS=Zea... 0.17 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 129 149
IPR022796 Chloroa_b-bind 35 123
No external refs found!