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  5. GSVIVT01028207001

GSVIVT01028207001


Description : Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0001898 (LandPlants) Phylogenetic Tree(s): OG_05_0001898_tree ,
OG_06_0001369 (SeedPlants) Phylogenetic Tree(s): OG_06_0001369_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028207001
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00162220 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017189001 No alias Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.05 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
Gb_15493 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os07g33780.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10437173g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_10437173g0020 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_18770g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_38272g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g14210.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp4g06670.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc05g018510.3.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Solyc09g091670.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 160 270
No external refs found!