GSVIVT01028315001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01028315001
Cluster	HCCA: Cluster_144

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00025p00249140	evm_27.TU.AmTr_v1...	Cell wall.cutin and suberin.biosynthesis...	0.02	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT3G60490	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.02	Archaeplastida
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028316001	No alias	No description available	0.05	Archaeplastida
GSVIVT01032961001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01035098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_12588	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_29168	No alias	Ethylene-responsive transcription factor ERF012...	0.04	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.07	Archaeplastida
LOC_Os02g55380.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
LOC_Os03g08490.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g09717.1	No alias	Ethylene-responsive transcription factor ERF018...	0.04	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os08g35240.1	No alias	Ethylene-responsive transcription factor ERF017...	0.06	Archaeplastida
LOC_Os08g44960.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os09g39810.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_115502g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_180106g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_42369g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.02	Archaeplastida
MA_912855g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_93229g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp6g18650.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Pp3c26_1890V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Pp3c4_23930V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c5_4370V3.1	No alias	No annotation	0.05	Archaeplastida
Smo104978	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.1	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g005520.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g026270.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.03	Archaeplastida
Solyc03g026280.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.04	Archaeplastida
Solyc04g054910.4.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc04g072900.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g052050.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g052410.3.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g066350.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc12g009240.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e015328_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e015429_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e015968_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e021331_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e023686_P001	No alias	transcription factor (ERF)	0.08	Archaeplastida
Zm00001e038819_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
BP	GO:0016559	peroxisome fission	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Neighborhood
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Neighborhood
CC	GO:0031301	integral component of organelle membrane	IEP	Neighborhood
CC	GO:0044438	microbody part	IEP	Neighborhood
CC	GO:0044439	peroxisomal part	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0048285	organelle fission	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	138	187

External Links

No external refs found!

GSVIVT01028315001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation