GSVIVT01028315001


Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028315001
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00009p00268560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.02 Archaeplastida
AMTR_s00058p00066390 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 Archaeplastida
AMTR_s00099p00122430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00148p00084540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT3G60490 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.02 Archaeplastida
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028316001 No alias No description available 0.05 Archaeplastida
GSVIVT01032961001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01035098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
Gb_02790 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_12588 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_23870 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_29168 No alias Ethylene-responsive transcription factor ERF012... 0.04 Archaeplastida
LOC_Os01g66270.1 No alias transcription factor (DREB) 0.07 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
LOC_Os03g08490.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g46240.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os06g09717.1 No alias Ethylene-responsive transcription factor ERF018... 0.04 Archaeplastida
LOC_Os06g10780.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os07g22730.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g35240.1 No alias Ethylene-responsive transcription factor ERF017... 0.06 Archaeplastida
LOC_Os08g44960.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os09g39810.1 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_115502g0010 No alias transcription factor (DREB) 0.05 Archaeplastida
MA_180106g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_42369g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_5730259g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5979847g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_71018g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_891091g0010 No alias Ethylene-responsive transcription factor 1A... 0.02 Archaeplastida
MA_912855g0010 No alias transcription factor (ERF) 0.06 Archaeplastida
MA_93229g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_9905g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp6g18650.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Pp3c26_1890V3.1 No alias erf domain protein 9 0.03 Archaeplastida
Pp3c4_23930V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c5_4370V3.1 No alias No annotation 0.05 Archaeplastida
Smo104978 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
Solyc01g090370.3.1 No alias transcription factor (ERF) 0.1 Archaeplastida
Solyc02g090800.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g005520.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g026270.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc03g026280.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 Archaeplastida
Solyc04g054910.4.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc04g072900.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc05g051180.3.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc05g051200.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052050.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052410.3.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc09g066350.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc12g009240.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e000609_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e015328_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015968_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021331_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023686_P001 No alias transcription factor (ERF) 0.08 Archaeplastida
Zm00001e038819_P001 No alias transcription factor (DREB) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 138 187
No external refs found!