GSVIVT01028354001

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0004626 (SeedPlants) Phylogenetic Tree(s): OG_06_0004626_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01028354001
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00063550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00010p00260100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
AMTR_s00017p00255350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00068p00207380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00079p00099620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00099p00131560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.01	Archaeplastida
AT1G32770	ANAC012, NST3,...	NAC domain containing protein 12	0.01	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.01	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.01	Archaeplastida
AT1G77450	NAC032, anac032	NAC domain containing protein 32	0.03	Archaeplastida
AT2G24430	ANAC039, NAC038, ANAC038	NAC domain containing protein 38	0.02	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.01	Archaeplastida
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.03	Archaeplastida
AT3G49530	ANAC062, NAC062, NTL6	NAC domain containing protein 62	0.02	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.01	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.01	Archaeplastida
AT5G08790	anac081, ATAF2	NAC (No Apical Meristem) domain transcriptional...	0.01	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.02	Archaeplastida
GSVIVT01014403001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01019670001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01020834001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
GSVIVT01023123001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
GSVIVT01036682001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.08	Archaeplastida
Gb_35048	No alias	transcription factor (NAC)	0.01	Archaeplastida
Gb_41026	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g29840.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g60020.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os01g66120.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os03g21030.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os03g42630.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os04g59470.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os05g34310.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os05g34830.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os06g04090.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
LOC_Os07g12340.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os07g48550.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os10g33760.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os11g08210.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os11g29430.1	No alias	no hits & (original description: none)	0.09	Archaeplastida
MA_10426704g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_10431997g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_109677g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_137415g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_21732g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_23113g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.01	Archaeplastida
MA_40991g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_5115g0010	No alias	transcription factor (NAC)	0.01	Archaeplastida
MA_64687g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_80232g0010	No alias	transcription factor (NAC)	0.01	Archaeplastida
MA_86256g0010	No alias	transcription factor (NAC)	0.01	Archaeplastida
Solyc02g069960.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
Solyc05g021090.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g034340.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g063430.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc08g006020.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc10g006880.3.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
Solyc11g017470.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc11g018660.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc12g013620.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc12g036480.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e006136_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007411_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e009234_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e012429_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e013320_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023635_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029194_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.01	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e038934_P001	No alias	transcription factor (NAC)	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	11	137

External Links

No external refs found!

GSVIVT01028354001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation