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  5. GSVIVT01028440001

GSVIVT01028440001


Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter


Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000437 (LandPlants) Phylogenetic Tree(s): OG_05_0000437_tree ,
OG_06_0010633 (SeedPlants) Phylogenetic Tree(s): OG_06_0010633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028440001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00165240 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00090p00176020 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00149p00037740 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT1G30400 ABCC1, ATABCC1,... multidrug resistance-associated protein 1 0.01 Archaeplastida
AT1G30410 ABCC12, MRP13, ATMRP13 multidrug resistance-associated protein 13 0.07 Archaeplastida
AT1G30420 ATMRP12, MRP12, ABCC11 multidrug resistance-associated protein 12 0.02 Archaeplastida
AT3G13080 ABCC3, ATMRP3, MRP3 multidrug resistance-associated protein 3 0.04 Archaeplastida
Cre02.g097800 No alias ABC transporter C family member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre17.g734612 No alias ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01021589001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_35586 No alias subfamily ABCC transporter 0.03 Archaeplastida
LOC_Os11g05700.1 No alias subfamily ABCC transporter 0.01 Archaeplastida
MA_10429932g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434717g0010 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp5g13220.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Pp3c1_20660V3.1 No alias multidrug resistance-associated protein 14 0.03 Archaeplastida
Pp3c21_7530V3.1 No alias multidrug resistance-associated protein 5 0.01 Archaeplastida
Smo81581 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc08g006880.3.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Zm00001e006905_P001 No alias subfamily ABCC transporter 0.08 Archaeplastida
Zm00001e040598_P001 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 548 682
IPR011527 ABC1_TM_dom 798 1039
IPR011527 ABC1_TM_dom 333 545
IPR003439 ABC_transporter-like 1131 1279
No external refs found!