GSVIVT01028474001


Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028474001
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
AMTR_s00022p00153780 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00168p00074090 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.04 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.04 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.04 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.04 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.04 Archaeplastida
AT5G39260 EXPA21, EXP21,... expansin A21 0.04 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.03 Archaeplastida
AT5G39280 ATHEXP ALPHA ... expansin A23 0.03 Archaeplastida
AT5G39290 ATEXP26, ATHEXP... expansin A26 0.04 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.04 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01030192001 No alias Expansin-A2 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.03 Archaeplastida
Gb_04404 No alias alpha-class expansin 0.03 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.04 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.03 Archaeplastida
Gb_16008 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os02g16780.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16839.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g51040.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.03 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10429288g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_10434805g0030 No alias alpha-class expansin 0.03 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_651027g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_70880g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_915221g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g28890.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g12280.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp4g22180.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp5g20430.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c13_8440V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18450V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.04 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.03 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Smo419575 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc03g031840.3.1 No alias No annotation 0.04 Archaeplastida
Solyc03g115270.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115320.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc03g115890.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc06g049050.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc07g063210.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc09g018020.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.07 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 150 226
IPR009009 RlpA-like_DPBB 55 138
No external refs found!