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Description : RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-ABI3 transcription factor
Gene families : OG0001110 (Archaeplastida) Phylogenetic Tree(s): OG0001110_tree ,
OG_05_0000678 (LandPlants) Phylogenetic Tree(s): OG_05_0000678_tree ,
OG_06_0000807 (SeedPlants) Phylogenetic Tree(s): OG_06_0000807_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01028540001 | |
| Cluster | HCCA: Cluster_131 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00034730 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
| AT1G28300 | LEC2 | AP2/B3-like transcriptional factor family protein | 0.12 | Archaeplastida | |
| AT3G24650 | ABI3, SIS10 | AP2/B3-like transcriptional factor family protein | 0.05 | Archaeplastida | |
| AT3G26790 | FUS3 | AP2/B3-like transcriptional factor family protein | 0.12 | Archaeplastida | |
| Gb_01768 | No alias | transcription factor (LAV-ABI3) | 0.05 | Archaeplastida | |
| LOC_Os01g68370.1 | No alias | transcription factor (LAV-ABI3) | 0.02 | Archaeplastida | |
| Mp2g08260.1 | No alias | transcription factor (LAV-ABI3) | 0.02 | Archaeplastida | |
| Pp3c15_15020V3.1 | No alias | AP2/B3-like transcriptional factor family protein | 0.02 | Archaeplastida | |
| Pp3c18_16640V3.1 | No alias | AP2/B3-like transcriptional factor family protein | 0.03 | Archaeplastida | |
| Solyc02g094460.2.1 | No alias | transcription factor (LAV-ABI3) | 0.08 | Archaeplastida | |
| Solyc06g083590.4.1 | No alias | transcription factor (LAV-ABI3) | 0.05 | Archaeplastida | |
| Solyc06g083600.3.1 | No alias | transcription factor (LAV-ABI3) | 0.11 | Archaeplastida | |
| Zm00001e018872_P002 | No alias | transcription factor (LAV-ABI3) | 0.03 | Archaeplastida | |
| Zm00001e029107_P002 | No alias | transcription factor (LAV-ABI3) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004451 | isocitrate lyase activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| BP | GO:0005985 | sucrose metabolic process | IEP | Neighborhood |
| BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
| MF | GO:0008061 | chitin binding | IEP | Neighborhood |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
| MF | GO:0016157 | sucrose synthase activity | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Neighborhood |
| BP | GO:0019915 | lipid storage | IEP | Neighborhood |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
| BP | GO:0043631 | RNA polyadenylation | IEP | Neighborhood |
| MF | GO:0045735 | nutrient reservoir activity | IEP | Neighborhood |
| BP | GO:0051235 | maintenance of location | IEP | Neighborhood |
| BP | GO:0070085 | glycosylation | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003340 | B3_DNA-bd | 425 | 521 |
| No external refs found! |