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  5. GSVIVT01028555001

GSVIVT01028555001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0012750 (SeedPlants) Phylogenetic Tree(s): OG_06_0012750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028555001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00181650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT2G37740 ZFP10, ATZFP10 zinc-finger protein 10 0.03 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01027720001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os05g05970.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os12g42250.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_110160g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c17_17640V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
Pp3c23_2190V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c23_960V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c6_19230V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc05g009380.4.1 No alias Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g011890.2.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!