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  5. GSVIVT01028579001

GSVIVT01028579001


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.VAMP7-type protein


Gene families : OG0000293 (Archaeplastida) Phylogenetic Tree(s): OG0000293_tree ,
OG_05_0000618 (LandPlants) Phylogenetic Tree(s): OG_05_0000618_tree ,
OG_06_0000855 (SeedPlants) Phylogenetic Tree(s): OG_06_0000855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028579001
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AT2G33120 SAR1, ATVAMP722, VAMP722 synaptobrevin-related protein 1 0.03 Archaeplastida
AT4G32150 ATVAMP711, VAMP711 vesicle-associated membrane protein 711 0.03 Archaeplastida
Cpa|evm.model.tig00000870.21 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Cre04.g224800 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Cre04.g225850 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 Archaeplastida
Cre04.g225900 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
LOC_Os03g58840.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
LOC_Os06g07780.1 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
LOC_Os07g09600.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
LOC_Os07g14540.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
LOC_Os08g44430.2 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
MA_11045g0010 No alias VAMP7-type R-type SNARE longin protein 0.05 Archaeplastida
MA_85409g0010 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
MA_92947g0030 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
MA_94963g0010 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.04 Archaeplastida
Mp4g07690.1 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.04 Archaeplastida
Pp3c12_11090V3.1 No alias vesicle-associated membrane protein 726 0.04 Archaeplastida
Solyc02g069150.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.05 Archaeplastida
Solyc06g083530.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.04 Archaeplastida
Zm00001e000500_P003 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
Zm00001e003924_P002 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
Zm00001e011409_P003 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Zm00001e024278_P001 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
Zm00001e033056_P001 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Zm00001e039018_P001 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004150 dihydroneopterin aldolase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 129 215
IPR010908 Longin_dom 32 111
No external refs found!