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  5. GSVIVT01028726001

GSVIVT01028726001


No description available


Gene families : OG0000178 (Archaeplastida) Phylogenetic Tree(s): OG0000178_tree ,
OG_05_0000118 (LandPlants) Phylogenetic Tree(s): OG_05_0000118_tree ,
OG_06_0000057 (SeedPlants) Phylogenetic Tree(s): OG_06_0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028726001
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00056600 No alias No description available 0.03 Archaeplastida
AT3G13020 No alias hAT transposon superfamily protein 0.02 Archaeplastida
GSVIVT01027351001 No alias No description available 0.03 Archaeplastida
Solyc03g007510.4.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc06g030510.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007021 DUF659 221 372
IPR008906 HATC_C_dom 590 660
IPR003656 Znf_BED 60 95
No external refs found!