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  5. GSVIVT01028809001

GSVIVT01028809001


Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0010992 (Archaeplastida) Phylogenetic Tree(s): OG0010992_tree ,
OG_05_0010949 (LandPlants) Phylogenetic Tree(s): OG_05_0010949_tree ,
OG_06_0010917 (SeedPlants) Phylogenetic Tree(s): OG_06_0010917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028809001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00075p00150250 evm_27.TU.AmTr_v1... ABC transporter G family member 8 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT5G52860 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
LOC_Os06g30730.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc03g007690.1.1 No alias subfamily ABCG transporter 0.09 Archaeplastida
Zm00001e036158_P002 No alias subfamily ABCG transporter 0.12 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 60 203
IPR013525 ABC_2_trans 331 539
No external refs found!