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  5. GSVIVT01028905001

GSVIVT01028905001


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0012765 (LandPlants) Phylogenetic Tree(s): OG_05_0012765_tree ,
OG_06_0001357 (SeedPlants) Phylogenetic Tree(s): OG_06_0001357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028905001
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT5G02540 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Archaeplastida
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
MA_10428788g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Solyc03g112540.4.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 Archaeplastida
Solyc08g082870.3.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!