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  5. GSVIVT01028917001

GSVIVT01028917001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36 component


Gene families : OG0002126 (Archaeplastida) Phylogenetic Tree(s): OG0002126_tree ,
OG_05_0001928 (LandPlants) Phylogenetic Tree(s): OG_05_0001928_tree ,
OG_06_0001842 (SeedPlants) Phylogenetic Tree(s): OG_06_0001842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028917001
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00179170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
AT2G37600 No alias Ribosomal protein L36e family protein 0.16 Archaeplastida
AT3G53740 No alias Ribosomal protein L36e family protein 0.25 Archaeplastida
AT5G02450 No alias Ribosomal protein L36e family protein 0.26 Archaeplastida
Cpa|evm.model.tig00021493.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
Cre12.g484050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 Archaeplastida
Gb_10248 No alias component RPL36 of LSU proteome component 0.14 Archaeplastida
Gb_27261 No alias component RPL36 of LSU proteome component 0.14 Archaeplastida
LOC_Os01g62350.1 No alias component RPL36 of LSU proteome component 0.16 Archaeplastida
LOC_Os05g38520.1 No alias component RPL36 of LSU proteome component 0.24 Archaeplastida
MA_10430792g0010 No alias component RPL36 of LSU proteome component 0.11 Archaeplastida
MA_24782g0010 No alias component RPL36 of LSU proteome component 0.09 Archaeplastida
MA_69756g0010 No alias component RPL36 of LSU proteome component 0.07 Archaeplastida
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.26 Archaeplastida
Pp3c14_19960V3.1 No alias Ribosomal protein L36e family protein 0.29 Archaeplastida
Pp3c1_32310V3.1 No alias Ribosomal protein L36e family protein 0.13 Archaeplastida
Pp3c2_9650V3.1 No alias Ribosomal protein L36e family protein 0.26 Archaeplastida
Smo267958 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Smo439710 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Solyc03g025520.4.1 No alias component RPL36 of LSU proteome component 0.16 Archaeplastida
Solyc06g036050.4.1 No alias component RPL36 of LSU proteome component 0.08 Archaeplastida
Zm00001e027238_P001 No alias component RPL36 of LSU proteome component 0.31 Archaeplastida
Zm00001e031832_P002 No alias component RPL36 of LSU proteome component 0.24 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 8 101
No external refs found!