1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01028941001

GSVIVT01028941001


Description : Tubulin beta-8 chain OS=Arabidopsis thaliana


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree ,
OG_06_0002229 (SeedPlants) Phylogenetic Tree(s): OG_06_0002229_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028941001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00190040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AT2G29550 TUB7 tubulin beta-7 chain 0.06 Archaeplastida
AT5G62690 TUB2 tubulin beta chain 2 0.07 Archaeplastida
AT5G62700 TUB3 tubulin beta chain 3 0.08 Archaeplastida
GSVIVT01028948001 No alias Tubulin beta-9 chain OS=Gossypium hirsutum 0.02 Archaeplastida
Gb_15590 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Gb_18746 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
LOC_Os01g59150.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os02g07060.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
LOC_Os05g34170.2 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_10431251g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
MA_230579g0010 No alias Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.03 Archaeplastida
MA_230579g0020 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
MA_251404g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
MA_55439g0010 No alias Tubulin beta-1 chain OS=Solanum tuberosum... 0.05 Archaeplastida
MA_7436374g0010 No alias Tubulin beta-6 chain OS=Zea mays (sp|q41783|tbb6_maize : 276.0) 0.03 Archaeplastida
MA_79708g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
MA_947959g0010 No alias No annotation 0.03 Archaeplastida
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Pp3c6_7500V3.1 No alias tubulin beta 8 0.03 Archaeplastida
Solyc06g076640.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Solyc10g080940.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e000048_P003 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Zm00001e011926_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e030351_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e037773_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Neighborhood
CC GO:0000931 gamma-tubulin large complex IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
CC GO:0008274 gamma-tubulin ring complex IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0031503 protein-containing complex localization IEP Neighborhood
BP GO:0033566 gamma-tubulin complex localization IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034629 cellular protein-containing complex localization IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044450 microtubule organizing center part IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 191 278
IPR003008 Tubulin_FtsZ_GTPase 30 134
No external refs found!