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  5. GSVIVT01028990001

GSVIVT01028990001


Description : Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class XI myosin


Gene families : OG0000144 (Archaeplastida) Phylogenetic Tree(s): OG0000144_tree ,
OG_05_0114330 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0092546 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028990001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G04600 XIA, ATXIA myosin XI A 0.04 Archaeplastida
AT2G33240 ATXID, XID myosin XI D 0.04 Archaeplastida
Cpa|evm.model.tig00000241.22 No alias Myosin-11 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00020614.58 No alias Myosin-8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00020816.32 No alias Myosin-12 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_06923 No alias Myosin-1 OS=Arabidopsis thaliana (sp|q9lhe9|myo1_arath : 181.0) 0.04 Archaeplastida
Gb_18086 No alias Myosin-6 OS=Arabidopsis thaliana (sp|q9lkb9|myo6_arath : 801.0) 0.05 Archaeplastida
LOC_Os03g64290.1 No alias class XI myosin microfilament-based motor protein 0.02 Archaeplastida
LOC_Os06g29350.1 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
LOC_Os10g25565.1 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
MA_10433033g0020 No alias Myosin-12 OS=Arabidopsis thaliana (sp|f4iru3|myo12_arath : 701.0) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002710 Dilute_dom 1508 1612
IPR001609 Myosin_head_motor_dom 66 721
IPR000048 IQ_motif_EF-hand-BS 787 804
IPR000048 IQ_motif_EF-hand-BS 857 876
IPR000048 IQ_motif_EF-hand-BS 738 756
IPR000048 IQ_motif_EF-hand-BS 833 852
IPR004009 Myosin_N 11 48
No external refs found!