1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01028992001

GSVIVT01028992001


Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.7-hydroxymethyl chlorophyll(ide) a reductase


Gene families : OG0005612 (Archaeplastida) Phylogenetic Tree(s): OG0005612_tree ,
OG_05_0006450 (LandPlants) Phylogenetic Tree(s): OG_05_0006450_tree ,
OG_06_0005714 (SeedPlants) Phylogenetic Tree(s): OG_06_0005714_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028992001
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00096400 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.07 Archaeplastida
Gb_34355 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 Archaeplastida
MA_6348739g0010 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.05 Archaeplastida
MA_732747g0010 No alias 7-hydroxymethyl chlorophyll a reductase, chloroplastic... 0.04 Archaeplastida
MA_9928769g0020 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.04 Archaeplastida
Mp7g02790.1 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 Archaeplastida
Solyc09g091100.4.1 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR007525 FrhB_FdhB_C 197 344
IPR007516 Co_F420_Hydgase/DH_bsu_N 114 188
No external refs found!