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  5. GSVIVT01029025001

GSVIVT01029025001


Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001839 (LandPlants) Phylogenetic Tree(s): OG_05_0001839_tree ,
OG_06_0002105 (SeedPlants) Phylogenetic Tree(s): OG_06_0002105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029025001
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00241820 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.02 Archaeplastida
AMTR_s00062p00185880 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.02 Archaeplastida
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.02 Archaeplastida
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.04 Archaeplastida
AT2G33210 HSP60-2 heat shock protein 60-2 0.09 Archaeplastida
AT3G13860 HSP60-3A heat shock protein 60-3A 0.05 Archaeplastida
AT5G56500 No alias TCP-1/cpn60 chaperonin family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001269.7 No alias External stimuli response.temperature.Hsp... 0.01 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre06.g309100 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01031526001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Gb_32466 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.07 Archaeplastida
Gb_35390 No alias chaperone (Hsp60) 0.04 Archaeplastida
Gb_37654 No alias chaperone (Hsp60) 0.04 Archaeplastida
LOC_Os05g46290.1 No alias chaperone (Hsp60) 0.1 Archaeplastida
MA_10436324g0010 No alias chaperone (Hsp60) 0.05 Archaeplastida
MA_13240g0020 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_8569886g0010 No alias Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.02 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Pp3c13_7040V3.1 No alias heat shock protein 60 0.04 Archaeplastida
Solyc03g121640.3.1 No alias chaperone (Hsp60) 0.03 Archaeplastida
Solyc05g053470.3.1 No alias chaperone (Hsp60) 0.09 Archaeplastida
Solyc09g091180.3.1 No alias chaperone (Hsp60) 0.06 Archaeplastida
Zm00001e004641_P001 No alias chaperone (Hsp60) 0.06 Archaeplastida
Zm00001e012733_P002 No alias chaperone (Hsp60) 0.07 Archaeplastida
Zm00001e025409_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
Zm00001e029825_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
Zm00001e031536_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.05 Archaeplastida
Zm00001e032273_P004 No alias chaperone (Hsp60) 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 54 555
No external refs found!