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  5. GSVIVT01029035001

GSVIVT01029035001


Description : Solute transport.carrier-mediated transport.PAM71 manganese/calcium cation transporter


Gene families : OG0002115 (Archaeplastida) Phylogenetic Tree(s): OG0002115_tree ,
OG_05_0007499 (LandPlants) Phylogenetic Tree(s): OG_05_0007499_tree ,
OG_06_0007338 (SeedPlants) Phylogenetic Tree(s): OG_06_0007338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029035001
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AT1G64150 No alias Uncharacterized protein family (UPF0016) 0.1 Archaeplastida
Cpa|evm.model.tig00000711.67 No alias Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre16.g660000 No alias Solute transport.carrier-mediated transport.PAM71... 0.03 Archaeplastida
Gb_24383 No alias manganese/calcium cation transporter (BICAT) 0.03 Archaeplastida
LOC_Os01g12220.1 No alias manganese/calcium cation transporter (BICAT) 0.08 Archaeplastida
LOC_Os11g34180.1 No alias manganese/calcium cation transporter (BICAT) 0.1 Archaeplastida
MA_9249169g0010 No alias manganese/calcium cation transporter (BICAT) 0.03 Archaeplastida
Mp5g13170.1 No alias manganese/calcium cation transporter (BICAT) 0.03 Archaeplastida
Mp6g21360.1 No alias manganese/calcium cation transporter (BICAT) 0.03 Archaeplastida
Pp3c2_28570V3.1 No alias Uncharacterized protein family (UPF0016) 0.08 Archaeplastida
Pp3c7_26970V3.1 No alias Uncharacterized protein family (UPF0016) 0.07 Archaeplastida
Solyc08g081770.3.1 No alias manganese/calcium cation transporter (BICAT) 0.1 Archaeplastida
Solyc09g091240.4.1 No alias manganese/calcium cation transporter (BICAT) 0.14 Archaeplastida
Zm00001e008707_P003 No alias manganese/calcium cation transporter (BICAT) 0.1 Archaeplastida
Zm00001e026075_P001 No alias manganese/calcium cation transporter (BICAT) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0004807 triose-phosphate isomerase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001727 Gdt1 273 346
IPR001727 Gdt1 143 221
No external refs found!