1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01029145001

GSVIVT01029145001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000210 (SeedPlants) Phylogenetic Tree(s): OG_06_0000210_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029145001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00009p00263240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00038p00150140 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.01 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.01 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.01 Archaeplastida
AT2G13960 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.02 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.02 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.02 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.01 Archaeplastida
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.07 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.01 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.02 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.04 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.02 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.02 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 Archaeplastida
AT5G23000 MYB37, RAX1, ATMYB37 myb domain protein 37 0.04 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.01 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.01 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.01 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.02 Archaeplastida
AT5G56110 MYB103,... myb domain protein 103 0.01 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.02 Archaeplastida
GSVIVT01000449001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011417001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013735001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01032452001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01034041001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_02419 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_34464 No alias Transcription factor GAMYB OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10048467g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10425867g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.1 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_499305g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_8626g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_87695g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_94130g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_95339g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_95534g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.01 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.01 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.01 Archaeplastida
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84369 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g079360.1.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g009230.3.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.09 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc06g083900.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g005870.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g082890.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc09g090130.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.01 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g049300.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g049350.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e019501_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028201_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e041551_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 70 112
IPR001005 SANT/Myb 14 63
No external refs found!