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  5. AMTR_s00044p00056720

AMTR_s00044p00056720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.27

Description : Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0000088 (LandPlants) Phylogenetic Tree(s): OG_05_0000088_tree ,
OG_06_0015038 (SeedPlants) Phylogenetic Tree(s): OG_06_0015038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00056720
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00253880 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.05 Archaeplastida
AT2G47140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 Archaeplastida
AT3G26760 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Archaeplastida
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Archaeplastida
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.06 Archaeplastida
GSVIVT01024621001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028200001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01033919001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Gb_05039 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_17570 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_25236 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_30885 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Gb_40683 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g18740.1 No alias Sex determination protein tasselseed-2 OS=Zea mays... 0.03 Archaeplastida
LOC_Os03g61740.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os04g33240.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os07g46830.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
LOC_Os07g46840.1 No alias Tropinone reductase-like 2 OS=Erythroxylum coca... 0.07 Archaeplastida
LOC_Os07g46910.1 No alias Tropinone reductase-like 2 OS=Erythroxylum coca... 0.03 Archaeplastida
LOC_Os07g46950.2 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
LOC_Os07g46970.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
LOC_Os11g32030.1 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_10435071g0010 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10436701g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_10436701g0020 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
MA_107740g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.04 Archaeplastida
MA_109050g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_57399g0020 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
MA_97011g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp5g00680.1 No alias Short-chain dehydrogenase reductase 3c OS=Arabidopsis... 0.03 Archaeplastida
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.03 Archaeplastida
Smo79955 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc10g083170.2.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Solyc11g018600.1.1 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc12g056600.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Solyc12g056710.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Zm00001e008424_P001 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e021516_P001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e035437_P002 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!