GSVIVT01029198001

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01029198001
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00182440	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00182630	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00021p00172130	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.03	Archaeplastida
AT2G29100	ATGLR2.9, GLR2.9	glutamate receptor 2.9	0.04	Archaeplastida
AT2G29110	GLR2.8, ATGLR2.8	glutamate receptor 2.8	0.03	Archaeplastida
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.08	Archaeplastida
AT3G04110	ATGLR1.1, GLR1.1, GLR1	glutamate receptor 1.1	0.05	Archaeplastida
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.03	Archaeplastida
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.03	Archaeplastida
GSVIVT01014244001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01014251001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01021161001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01030602001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
GSVIVT01033137001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
GSVIVT01033139001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01033163001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.06	Archaeplastida
LOC_Os02g54640.1	No alias	ligand-gated cation channel (GLR)	0.06	Archaeplastida
LOC_Os09g26144.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_391859g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc05g045650.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc06g063180.3.1	No alias	ligand-gated cation channel (GLR)	0.08	Archaeplastida
Solyc06g063190.3.1	No alias	ligand-gated cation channel (GLR)	0.11	Archaeplastida
Solyc06g063200.2.1	No alias	ligand-gated cation channel (GLR)	0.1	Archaeplastida
Solyc06g063210.3.1	No alias	ligand-gated cation channel (GLR)	0.09	Archaeplastida
Solyc07g052400.3.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001320	Iontro_rcpt	584	613
IPR001828	ANF_lig-bd_rcpt	2	184
IPR001638	Solute-binding_3/MltF_N	269	583

External Links

No external refs found!

GSVIVT01029198001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation