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  5. GSVIVT01029229001

GSVIVT01029229001


Description : External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.ADO-type photoreceptor


Gene families : OG0001227 (Archaeplastida) Phylogenetic Tree(s): OG0001227_tree ,
OG_05_0002873 (LandPlants) Phylogenetic Tree(s): OG_05_0002873_tree ,
OG_06_0002844 (SeedPlants) Phylogenetic Tree(s): OG_06_0002844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029229001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT5G57360 LKP1, ADO1, ZTL, FKL2 Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
LOC_Os06g47890.2 No alias component ADO of SCF E3 ubiquitin ligase complex.... 0.03 Archaeplastida
Pp3c25_6710V3.1 No alias Kelch repeat-containing F-box family protein 0.03 Archaeplastida
Zm00001e013113_P003 No alias component ADO of SCF E3 ubiquitin ligase complex.... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR011498 Kelch_2 89 139
IPR011498 Kelch_2 156 203
No external refs found!