GSVIVT01029232001


Description : Protein trichome birefringence-like 5 OS=Arabidopsis thaliana


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029232001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT2G30010 TBL45 TRICHOME BIREFRINGENCE-LIKE 45 0.03 Archaeplastida
AT2G34070 TBL37 TRICHOME BIREFRINGENCE-LIKE 37 0.04 Archaeplastida
AT5G06700 TBR Plant protein of unknown function (DUF828) 0.03 Archaeplastida
GSVIVT01014106001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01024714001 No alias Protein PMR5 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_23719 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 Archaeplastida
LOC_Os01g61460.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os01g65800.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g10560.1 No alias Protein trichome birefringence-like 1 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os11g01370.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc01g068430.3.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g096030.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 49 316
IPR025846 PMR5_N_dom 2 48
No external refs found!