GSVIVT01029254001

Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC9 component

Gene families : OG0001359 (Archaeplastida) Phylogenetic Tree(s): OG0001359_tree ,
OG_05_0001061 (LandPlants) Phylogenetic Tree(s): OG_05_0001061_tree ,
OG_06_0010157 (SeedPlants) Phylogenetic Tree(s): OG_06_0010157_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01029254001
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Gb_13980	No alias	ssDNA-binding protein (OSB)	0.03	Archaeplastida
MA_10436156g0010	No alias	ssDNA-binding protein (OSB)	0.03	Archaeplastida
Zm00001e012422_P001	No alias	ssDNA-binding protein (OSB)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003697	single-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000424	Primosome_PriB/ssb	106	179

External Links

No external refs found!

GSVIVT01029254001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation