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  5. GSVIVT01029329001

GSVIVT01029329001


Description : Nutrient uptake.iron uptake.chelation-based strategy uptake.YSL-type Fe(III)-chelator transporter


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0010662 (LandPlants) Phylogenetic Tree(s): OG_05_0010662_tree ,
OG_06_0011069 (SeedPlants) Phylogenetic Tree(s): OG_06_0011069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029329001
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00229010 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.05 Archaeplastida
AMTR_s00029p00088380 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL5... 0.04 Archaeplastida
AMTR_s00029p00088690 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.04 Archaeplastida
AMTR_s00029p00090040 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.04 Archaeplastida
Gb_14706 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.05 Archaeplastida
Gb_40334 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
LOC_Os04g44300.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os04g44320.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_10432971g0020 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida
MA_10433998g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
Solyc03g031920.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Solyc03g082620.4.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Solyc08g083060.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e041266_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 376 499
IPR004813 OPT 1 290
No external refs found!