1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01029388001

GSVIVT01029388001


Description : Carbohydrate metabolism.sucrose metabolism.degradation.sucrose synthase


Gene families : OG0000655 (Archaeplastida) Phylogenetic Tree(s): OG0000655_tree ,
OG_05_0000675 (LandPlants) Phylogenetic Tree(s): OG_05_0000675_tree ,
OG_06_0006251 (SeedPlants) Phylogenetic Tree(s): OG_06_0006251_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029388001
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT1G73370 ATSUS6, SUS6 sucrose synthase 6 0.15 Archaeplastida
AT5G37180 ATSUS5, SUS5 sucrose synthase 5 0.14 Archaeplastida
AT5G49190 SSA, ATSUS2, SUS2 sucrose synthase 2 0.03 Archaeplastida
Gb_12813 No alias Sucrose synthase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_12814 No alias Sucrose synthase 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_22873 No alias sucrose synthase 0.05 Archaeplastida
LOC_Os02g58480.1 No alias sucrose synthase 0.04 Archaeplastida
LOC_Os04g17650.1 No alias sucrose synthase 0.05 Archaeplastida
MA_10429251g0010 No alias sucrose synthase 0.08 Archaeplastida
MA_10430807g0030 No alias sucrose synthase 0.07 Archaeplastida
MA_127762g0010 No alias sucrose synthase 0.02 Archaeplastida
Solyc02g081300.3.1 No alias sucrose synthase 0.16 Archaeplastida
Solyc12g009300.3.1 No alias sucrose synthase 0.05 Archaeplastida
Zm00001e013341_P001 No alias sucrose synthase 0.05 Archaeplastida
Zm00001e023518_P002 No alias no hits & (original description: none) 0.1 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEA Interproscan
MF GO:0016157 sucrose synthase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 568 735
IPR000368 Sucrose_synth 12 558
No external refs found!