GSVIVT01029396001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP IV transcription factor


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0004621 (SeedPlants) Phylogenetic Tree(s): OG_06_0004621_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029396001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00094630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
AMTR_s00048p00089530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00069p00091460 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G73360 EDT1, HDG11, ATHDG11 homeodomain GLABROUS 11 0.04 Archaeplastida
AT4G04890 PDF2 protodermal factor 2 0.03 Archaeplastida
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.04 Archaeplastida
Gb_29468 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
LOC_Os04g53540.3 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
LOC_Os06g10600.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
LOC_Os08g08820.2 No alias transcription factor (HD-ZIP IV) 0.09 Archaeplastida
LOC_Os09g35760.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_483958g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Mp7g09710.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc06g072310.3.1 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Zm00001e002453_P001 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Zm00001e015997_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e021649_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e034755_P001 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Zm00001e039947_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e041435_P003 No alias transcription factor (HD-ZIP IV) 0.08 Archaeplastida
Zm00001e042218_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 226 450
IPR001356 Homeobox_dom 27 82
No external refs found!