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  5. GSVIVT01029528001

GSVIVT01029528001


Description : Cell wall.pectin.modification and degradation.polygalacturonase activities.QRT3 polygalacturonase


Gene families : OG0003590 (Archaeplastida) Phylogenetic Tree(s): OG0003590_tree ,
OG_05_0002501 (LandPlants) Phylogenetic Tree(s): OG_05_0002501_tree ,
OG_06_0001950 (SeedPlants) Phylogenetic Tree(s): OG_06_0001950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029528001
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s03255p00000400 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.02 Archaeplastida
MA_917578g0010 No alias polygalacturonase (QRT3) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 72 280
No external refs found!