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  5. GSVIVT01029730001

GSVIVT01029730001


Description : RNA processing.ribonuclease activities.RNase P ribonuclease activities.protein-only RNase P


Gene families : OG0001660 (Archaeplastida) Phylogenetic Tree(s): OG0001660_tree ,
OG_05_0001623 (LandPlants) Phylogenetic Tree(s): OG_05_0001623_tree ,
OG_06_0001647 (SeedPlants) Phylogenetic Tree(s): OG_06_0001647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029730001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00150030 evm_27.TU.AmTr_v1... RNA processing.ribonuclease activities.RNase P... 0.09 Archaeplastida
AMTR_s00109p00079620 evm_27.TU.AmTr_v1... RNA processing.ribonuclease activities.RNase P... 0.02 Archaeplastida
AT2G32230 PRORP1 proteinaceous RNase P 1 0.04 Archaeplastida
MA_10429392g0010 No alias protein-only ribonuclease (RNase P) 0.03 Archaeplastida
MA_10437063g0010 No alias protein-only ribonuclease (RNase P) 0.05 Archaeplastida
Pp3c10_16850V3.1 No alias proteinaceous RNase P 1 0.02 Archaeplastida
Smo80247 No alias RNA processing.ribonuclease activities.RNase P... 0.07 Archaeplastida
Solyc07g019650.4.1 No alias protein-only ribonuclease (RNase P) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR033443 PPR_long 1 96
IPR031595 PRORP_C 98 324
No external refs found!