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  5. GSVIVT01029824001

GSVIVT01029824001


Description : External stimuli response.gravity.sensing and signalling.SCR transcription factor


Gene families : OG0002751 (Archaeplastida) Phylogenetic Tree(s): OG0002751_tree ,
OG_05_0001850 (LandPlants) Phylogenetic Tree(s): OG_05_0001850_tree ,
OG_06_0001742 (SeedPlants) Phylogenetic Tree(s): OG_06_0001742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029824001
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00211410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.05 Archaeplastida
AMTR_s04794p00002520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
LOC_Os07g38030.1 No alias transcription factor (GRAS) 0.06 Archaeplastida
Pp3c19_18560V3.1 No alias GRAS family transcription factor 0.03 Archaeplastida
Solyc09g066450.3.1 No alias transcription factor (GRAS) 0.04 Archaeplastida
Zm00001e009237_P001 No alias transcription factor (GRAS). SCR gravity signalling... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 293 648
No external refs found!