GSVIVT01029933001


Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component


Gene families : OG0005710 (Archaeplastida) Phylogenetic Tree(s): OG0005710_tree ,
OG_05_0007950 (LandPlants) Phylogenetic Tree(s): OG_05_0007950_tree ,
OG_06_0008517 (SeedPlants) Phylogenetic Tree(s): OG_06_0008517_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029933001
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT2G38770 EMB2765 P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Cpa|evm.model.tig00001098.15 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Cre06.g300750 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Gb_24251 No alias component MAC7 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
LOC_Os03g26960.1 No alias component MAC7 of non-snRNP MOS4-associated complex 0.07 Archaeplastida
MA_10428908g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_3907g0010 No alias component MAC7 of non-snRNP MOS4-associated complex 0.04 Archaeplastida
Mp6g16570.1 No alias component MAC7 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Solyc01g068480.4.1 No alias component MAC7 of non-snRNP MOS4-associated complex 0.11 Archaeplastida
Zm00001e001866_P001 No alias component MAC7 of non-snRNP MOS4-associated complex 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR032174 Aquarius_N 47 541
IPR032174 Aquarius_N 559 700
No external refs found!