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  5. GSVIVT01029939001

GSVIVT01029939001


Description : Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0010134 (Archaeplastida) Phylogenetic Tree(s): OG0010134_tree ,
OG_05_0010185 (LandPlants) Phylogenetic Tree(s): OG_05_0010185_tree ,
OG_06_0009117 (SeedPlants) Phylogenetic Tree(s): OG_06_0009117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029939001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT5G17790 VAR3 zinc finger (Ran-binding) family protein 0.06 Archaeplastida
LOC_Os01g59980.1 No alias RNA editing factor (OZ-type) 0.03 Archaeplastida
Solyc01g057780.3.1 No alias RNA editing factor (OZ-type) 0.05 Archaeplastida
Zm00001e028874_P001 No alias RNA editing factor (OZ-type) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 307 333
IPR001876 Znf_RanBP2 273 300
No external refs found!