GSVIVT01029943001

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0001523 (SeedPlants) Phylogenetic Tree(s): OG_06_0001523_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01029943001
Cluster	HCCA: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AT1G26790	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G62430	CDF1	cycling DOF factor 1	0.04	Archaeplastida
Gb_07177	No alias	transcription factor (DOF)	0.05	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.01	Archaeplastida
MA_175298g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_2430g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.01	Archaeplastida
Solyc02g067230.3.1	No alias	transcription factor (DOF)	0.1	Archaeplastida
Solyc02g088070.3.1	No alias	transcription factor (DOF)	0.14	Archaeplastida
Solyc05g007880.4.1	No alias	Cyclic dof factor 2 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Solyc06g069760.3.1	No alias	transcription factor (DOF)	0.12	Archaeplastida
Zm00001e017319_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	101	157

External Links

No external refs found!