GSVIVT01029990001

Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein

Gene families : OG0007097 (Archaeplastida) Phylogenetic Tree(s): OG0007097_tree ,
OG_05_0008533 (LandPlants) Phylogenetic Tree(s): OG_05_0008533_tree ,
OG_06_0010084 (SeedPlants) Phylogenetic Tree(s): OG_06_0010084_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01029990001
Cluster	HCCA: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method
AT2G20890	PSB29, THF1	photosystem II reaction center PSB29 protein	0.1	Archaeplastida
Cre13.g562850	No alias	Photosynthesis.photophosphorylation.photosystem...	0.02	Archaeplastida
LOC_Os07g37250.1	No alias	Psb29 protein involved in PS-II assembly	0.03	Archaeplastida
MA_10426766g0010	No alias	Psb29 protein involved in PS-II assembly	0.05	Archaeplastida
Mp5g23000.1	No alias	Psb29 protein involved in PS-II assembly	0.04	Archaeplastida
Pp3c19_17570V3.1	No alias	photosystem II reaction center PSB29 protein	0.02	Archaeplastida
Pp3c21_14540V3.1	No alias	photosystem II reaction center PSB29 protein	0.08	Archaeplastida
Solyc07g054820.4.1	No alias	no hits & (original description: none)	0.12	Archaeplastida
Zm00001e035236_P001	No alias	Psb29 protein involved in PS-II assembly	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010207	photosystem II assembly	IEA	Interproscan
BP	GO:0015979	photosynthesis	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0009523	photosystem II	IEP	Neighborhood
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Neighborhood
BP	GO:0009767	photosynthetic electron transport chain	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
BP	GO:0017038	protein import	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
BP	GO:0022900	electron transport chain	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
CC	GO:1990204	oxidoreductase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR017499	Thf1	14	219

External Links

No external refs found!