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  5. GSVIVT01030058001

GSVIVT01030058001


Description : Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor


Gene families : OG0000347 (Archaeplastida) Phylogenetic Tree(s): OG0000347_tree ,
OG_05_0000886 (LandPlants) Phylogenetic Tree(s): OG_05_0000886_tree ,
OG_06_0001126 (SeedPlants) Phylogenetic Tree(s): OG_06_0001126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030058001
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AT2G01830 ATCRE1, WOL,... CHASE domain containing histidine kinase protein 0.03 Archaeplastida
Cpa|evm.model.tig00020629.10 No alias Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.01 Archaeplastida
Cpa|evm.model.tig00021517.20 No alias Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
LOC_Os02g50480.1 No alias receptor protein (AHK) 0.1 Archaeplastida
Pp3c1_20050V3.1 No alias histidine kinase 3 0.01 Archaeplastida
Pp3c22_15240V3.1 No alias histidine kinase 3 0.02 Archaeplastida
Pp3c6_7030V3.1 No alias CHASE domain containing histidine kinase protein 0.02 Archaeplastida
Pp3c9_21840V3.1 No alias histidine kinase 3 0.07 Archaeplastida
Zm00001e012161_P001 No alias receptor protein (AHK) 0.1 Archaeplastida
Zm00001e012902_P002 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e028437_P001 No alias receptor protein (AHK) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009584 detection of visible light IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0018298 protein-chromophore linkage IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR006189 CHASE_dom 359 553
IPR003661 HisK_dim/P 641 706
IPR003594 HATPase_C 753 882
IPR001789 Sig_transdc_resp-reg_receiver 1064 1196
No external refs found!