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  5. AMTR_s00044p00112360

AMTR_s00044p00112360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.85

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0002315 (SeedPlants) Phylogenetic Tree(s): OG_06_0002315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00112360
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G30370 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G01880 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
GSVIVT01030125001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_39486 No alias RING-H2 finger protein ATL16 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_280399g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_38494g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_46635g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_51630g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_55185g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_77628g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_92400g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Smo172324 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g094385.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e019438_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 93 136
No external refs found!