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  5. GSVIVT01030204001

GSVIVT01030204001


Description : RNA biosynthesis.transcriptional activation.OFP transcription factor


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000120 (SeedPlants) Phylogenetic Tree(s): OG_06_0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030204001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00212750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.08 Archaeplastida
AMTR_s00030p00234860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.05 Archaeplastida
AMTR_s00103p00131630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
AMTR_s00151p00080030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.04 Archaeplastida
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.02 Archaeplastida
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os05g44090.1 No alias transcription factor (OFP) 0.06 Archaeplastida
MA_134006g0010 No alias transcription factor (OFP) 0.05 Archaeplastida
Zm00001e000779_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010976_P001 No alias transcription factor (OFP) 0.06 Archaeplastida
Zm00001e019186_P001 No alias transcription factor (OFP) 0.07 Archaeplastida
Zm00001e019432_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e031752_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e039401_P001 No alias transcription factor (OFP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025830 DNA_bnd_dom_ovate 1 41
IPR006458 Ovate_C 214 269
No external refs found!