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  5. GSVIVT01030315001

GSVIVT01030315001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030315001
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT2G02060 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_36677 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os02g14490.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Pp3c23_19680V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c8_8720V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g051060.4.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc09g091880.4.1 No alias G2-like GARP transcription factor. transcription factor (PHR1) 0.04 Archaeplastida
Zm00001e007231_P002 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Zm00001e021698_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005542 folic acid binding IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 100 150
No external refs found!