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  5. GSVIVT01030430001

GSVIVT01030430001


Description : Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG8 ubiquitin-fold protein


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0001268 (LandPlants) Phylogenetic Tree(s): OG_05_0001268_tree ,
OG_06_0001955 (SeedPlants) Phylogenetic Tree(s): OG_06_0001955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030430001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT1G62040 ATG8C Ubiquitin-like superfamily protein 0.03 Archaeplastida
Cre16.g689650 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 Archaeplastida
Gb_21524 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.06 Archaeplastida
LOC_Os11g01010.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.04 Archaeplastida
MA_30699g0010 No alias ATG8 autophagosome ubiquitin-fold protein 0.05 Archaeplastida
Mp1g21590.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Solyc01g068060.4.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!