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  5. GSVIVT01030455001

GSVIVT01030455001


Description : Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis thaliana


Gene families : OG0010995 (Archaeplastida) Phylogenetic Tree(s): OG0010995_tree ,
OG_05_0010952 (LandPlants) Phylogenetic Tree(s): OG_05_0010952_tree ,
OG_06_0011507 (SeedPlants) Phylogenetic Tree(s): OG_06_0011507_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030455001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
LOC_Os05g18950.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Smo123482 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 304 329
IPR002885 Pentatricopeptide_repeat 162 191
IPR002885 Pentatricopeptide_repeat 193 220
No external refs found!