1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01030475001

GSVIVT01030475001


Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin I complex.CAP-H component


Gene families : OG0003391 (Archaeplastida) Phylogenetic Tree(s): OG0003391_tree ,
OG_05_0003930 (LandPlants) Phylogenetic Tree(s): OG_05_0003930_tree ,
OG_06_0004060 (SeedPlants) Phylogenetic Tree(s): OG_06_0004060_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030475001
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00055930 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromatin... 0.14 Archaeplastida
AT2G32590 No alias LOCATED IN: chloroplast; EXPRESSED IN: 17 plant... 0.2 Archaeplastida
Cpa|evm.model.tig00021462.43 No alias Cell cycle.mitosis and meiosis.chromatin... 0.05 Archaeplastida
Cre13.g589300 No alias Cell cycle.mitosis and meiosis.chromatin... 0.03 Archaeplastida
Gb_02904 No alias component CAP-H of condensin I complex 0.12 Archaeplastida
Gb_19968 No alias component CAP-H of condensin I complex 0.02 Archaeplastida
LOC_Os01g34870.1 No alias component CAP-H of condensin I complex 0.15 Archaeplastida
MA_10431431g0010 No alias component CAP-H of condensin I complex 0.11 Archaeplastida
MA_784139g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_98643g0010 No alias component CAP-H of condensin I complex 0.11 Archaeplastida
Mp1g27450.1 No alias component CAP-H of condensin I complex 0.11 Archaeplastida
Pp3c11_22430V3.1 No alias No annotation 0.06 Archaeplastida
Solyc07g049680.4.1 No alias component CAP-H of condensin I complex 0.15 Archaeplastida
Zm00001e020787_P001 No alias component CAP-H of condensin I complex 0.21 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEA Interproscan
BP GO:0007076 mitotic chromosome condensation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022816 Condensin_barren_su2 545 656
IPR022816 Condensin_barren_su2 28 515
No external refs found!