AMTR_s00044p00130430 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.118

No description available

Gene families : OG0012098 (Archaeplastida) Phylogenetic Tree(s): OG0012098_tree ,
OG_05_0011986 (LandPlants) Phylogenetic Tree(s): OG_05_0011986_tree ,
OG_06_0012029 (SeedPlants) Phylogenetic Tree(s): OG_06_0012029_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00044p00130430
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00003p00041030	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00017p00211380	evm_27.TU.AmTr_v1...	No description available	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!