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  5. GSVIVT01030589001

GSVIVT01030589001


Description : Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type)


Gene families : OG0000030 (Archaeplastida) Phylogenetic Tree(s): OG0000030_tree ,
OG_05_0002089 (LandPlants) Phylogenetic Tree(s): OG_05_0002089_tree ,
OG_06_0001144 (SeedPlants) Phylogenetic Tree(s): OG_06_0001144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030589001
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00126430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 Archaeplastida
AMTR_s00033p00071400 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 Archaeplastida
AMTR_s00045p00191740 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.02 Archaeplastida
AMTR_s00069p00129640 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.02 Archaeplastida
AMTR_s00070p00181900 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 Archaeplastida
AMTR_s00077p00047440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.02 Archaeplastida
AT1G15180 No alias MATE efflux family protein 0.06 Archaeplastida
AT4G23030 No alias MATE efflux family protein 0.02 Archaeplastida
GSVIVT01014309001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 Archaeplastida
GSVIVT01029134001 No alias No description available 0.03 Archaeplastida
GSVIVT01036812001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 Archaeplastida
Gb_25645 No alias metabolite transporter (DTX) 0.06 Archaeplastida
LOC_Os03g62270.1 No alias metabolite transporter (DTX) 0.04 Archaeplastida
LOC_Os05g48040.1 No alias metabolite transporter (DTX) 0.02 Archaeplastida
LOC_Os10g20450.1 No alias metabolite transporter (DTX) 0.04 Archaeplastida
MA_118262g0010 No alias metabolite transporter (DTX) 0.03 Archaeplastida
MA_2674g0010 No alias metabolite transporter (DTX) 0.03 Archaeplastida
Smo111626 No alias Solute transport.carrier-mediated transport.MOP... 0.03 Archaeplastida
Solyc02g090740.3.1 No alias metabolite transporter (DTX) 0.05 Archaeplastida
Solyc02g091070.3.1 No alias metabolite transporter (DTX) 0.05 Archaeplastida
Solyc03g034400.3.1 No alias metabolite transporter (DTX) 0.04 Archaeplastida
Solyc03g112250.1.1 No alias metabolite transporter (DTX) 0.03 Archaeplastida
Solyc08g080310.2.1 No alias metabolite transporter (DTX) 0.03 Archaeplastida
Solyc10g007370.2.1 No alias metabolite transporter (DTX) 0.03 Archaeplastida
Zm00001e002148_P001 No alias metabolite transporter (DTX) 0.03 Archaeplastida
Zm00001e004873_P001 No alias metabolite transporter (DTX) 0.04 Archaeplastida
Zm00001e012504_P001 No alias metabolite transporter (DTX) 0.04 Archaeplastida
Zm00001e014159_P001 No alias metabolite transporter (DTX) 0.04 Archaeplastida
Zm00001e020141_P001 No alias metabolite transporter (DTX) 0.04 Archaeplastida
Zm00001e035104_P001 No alias metabolite transporter (DTX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA Interproscan
MF GO:0015238 drug transmembrane transporter activity IEA Interproscan
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002528 MATE_fam 293 453
IPR002528 MATE_fam 71 231
No external refs found!