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  5. GSVIVT01030605001

GSVIVT01030605001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP IV transcription factor


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0001739 (SeedPlants) Phylogenetic Tree(s): OG_06_0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030605001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00094630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT4G04890 PDF2 protodermal factor 2 0.05 Archaeplastida
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.06 Archaeplastida
LOC_Os06g10600.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os08g08820.2 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
LOC_Os10g42490.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
MA_10318273g0010 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
MA_10374232g0010 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
MA_103885g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_10426189g0030 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_10433688g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_1086446g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_110607g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_16767g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_17048g0010 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
MA_305431g0010 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Pp3c17_16910V3.1 No alias protodermal factor 2 0.04 Archaeplastida
Solyc03g031760.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g072310.3.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc08g076370.3.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc10g005330.3.1 No alias transcription factor (HD-ZIP IV) 0.07 Archaeplastida
Zm00001e002453_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e017088_P001 No alias transcription factor (HD-ZIP IV) 0.07 Archaeplastida
Zm00001e021649_P002 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e023786_P003 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e034755_P001 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e039947_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e042218_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 90 145
IPR002913 START_lipid-bd_dom 279 498
No external refs found!