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  5. GSVIVT01030846001

GSVIVT01030846001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030846001
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.03 Archaeplastida
AT5G01305 No alias No description available 0.03 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.04 Archaeplastida
Gb_27302 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g56950.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
LOC_Os12g40590.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_29441g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
Mp6g21470.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c14_16620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 262 303
No external refs found!