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  5. GSVIVT01030963001

GSVIVT01030963001


Description : Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana


Gene families : OG0000443 (Archaeplastida) Phylogenetic Tree(s): OG0000443_tree ,
OG_05_0114541 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0092773 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030963001
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT1G56170 NF-YC2, ATHAP5B, HAP5B nuclear factor Y, subunit C2 0.09 Archaeplastida
Gb_17189 No alias component NF-YC of NF-Y transcription factor complex 0.02 Archaeplastida
MA_11029g0010 No alias component NF-YC of NF-Y transcription factor complex 0.03 Archaeplastida
MA_8756989g0010 No alias component NF-YC of NF-Y transcription factor complex 0.02 Archaeplastida
Solyc03g111450.3.1 No alias component NF-YC of NF-Y transcription factor complex 0.08 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 47
No external refs found!