AMTR_s00044p00145070 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.146

Description : Pentatricopeptide repeat-containing protein At2g17525, mitochondrial OS=Arabidopsis thaliana

Gene families : OG0000198 (Archaeplastida) Phylogenetic Tree(s): OG0000198_tree ,
OG_05_0000086 (LandPlants) Phylogenetic Tree(s): OG_05_0000086_tree ,
OG_06_0011312 (SeedPlants) Phylogenetic Tree(s): OG_06_0011312_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00044p00145070
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT2G17525 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
AT4G01400 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 Archaeplastida
AT5G18475 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 Archaeplastida
Gb_38400 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 205 237
IPR002885 Pentatricopeptide_repeat 563 605
IPR002885 Pentatricopeptide_repeat 311 359
IPR002885 Pentatricopeptide_repeat 241 288
IPR002885 Pentatricopeptide_repeat 489 537
IPR002885 Pentatricopeptide_repeat 425 448
IPR002885 Pentatricopeptide_repeat 466 486
IPR002885 Pentatricopeptide_repeat 109 137
IPR002885 Pentatricopeptide_repeat 384 412
No external refs found!