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  5. GSVIVT01031007001

GSVIVT01031007001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000307 (SeedPlants) Phylogenetic Tree(s): OG_06_0000307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031007001
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.08 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT1G66140 ZFP4 zinc finger protein 4 0.02 Archaeplastida
AT1G67030 ZFP6 zinc finger protein 6 0.05 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.07 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.03 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.09 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.07 Archaeplastida
AT5G06070 RAB, RBE C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G06650 GIS2 C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT5G14010 KNU C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.08 Archaeplastida
AT5G27880 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT5G48890 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.05 Archaeplastida
GSVIVT01011890001 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
GSVIVT01025803001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 Archaeplastida
Gb_04808 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_07777 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Gb_12546 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Gb_25685 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_26860 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Gb_27734 No alias Zinc finger protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os01g32920.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
LOC_Os02g01090.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g57550.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g05490.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g11680.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g41110.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g57240.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os04g08600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os05g14130.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g20930.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os07g23450.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g44190.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g26200.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g27320.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os09g38610.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os11g48000.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os12g42250.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_113057g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_54742g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_57615g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c6_19230V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida
Solyc05g009380.4.1 No alias Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g053720.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc08g077000.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Solyc09g061870.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc09g089590.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc10g078970.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g011890.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e009853_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e009854_P001 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e013845_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e025746_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.14 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!