Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000307 (SeedPlants) Phylogenetic Tree(s): OG_06_0000307_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01031007001 | |
Cluster | HCCA: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00057p00086480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.07 | Archaeplastida | |
AMTR_s00079p00109960 | evm_27.TU.AmTr_v1... | Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
AMTR_s00079p00169240 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | Archaeplastida | |
AMTR_s00088p00145510 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | Archaeplastida | |
AMTR_s00124p00105750 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | Archaeplastida | |
AMTR_s00149p00097070 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | Archaeplastida | |
AMTR_s00150p00049910 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | Archaeplastida | |
AT1G10480 | ZFP5 | zinc finger protein 5 | 0.08 | Archaeplastida | |
AT1G13400 | JGL, NUB | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | Archaeplastida | |
AT1G66140 | ZFP4 | zinc finger protein 4 | 0.02 | Archaeplastida | |
AT1G67030 | ZFP6 | zinc finger protein 6 | 0.05 | Archaeplastida | |
AT1G68360 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | Archaeplastida | |
AT1G80730 | ZFP1, ATZFP1 | zinc-finger protein 1 | 0.07 | Archaeplastida | |
AT2G42410 | ZFP11, ATZFP11 | zinc finger protein 11 | 0.03 | Archaeplastida | |
AT3G09290 | TAC1 | telomerase activator1 | 0.09 | Archaeplastida | |
AT3G23130 | SUP, FLO10, FON1 | C2H2 and C2HC zinc fingers superfamily protein | 0.05 | Archaeplastida | |
AT3G53820 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.07 | Archaeplastida | |
AT5G06070 | RAB, RBE | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | Archaeplastida | |
AT5G06650 | GIS2 | C2H2 and C2HC zinc fingers superfamily protein | 0.02 | Archaeplastida | |
AT5G10970 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.06 | Archaeplastida | |
AT5G14010 | KNU | C2H2 and C2HC zinc fingers superfamily protein | 0.06 | Archaeplastida | |
AT5G25160 | ZFP3 | zinc finger protein 3 | 0.08 | Archaeplastida | |
AT5G27880 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.04 | Archaeplastida | |
AT5G43540 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.06 | Archaeplastida | |
AT5G48890 | No alias | C2H2-like zinc finger protein | 0.04 | Archaeplastida | |
AT5G57520 | ATZFP2, ZFP2 | zinc finger protein 2 | 0.05 | Archaeplastida | |
GSVIVT01011890001 | No alias | Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica | 0.05 | Archaeplastida | |
GSVIVT01013168001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | Archaeplastida | |
GSVIVT01025803001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.01 | Archaeplastida | |
Gb_04808 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Gb_07777 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Gb_12546 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Gb_25685 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
Gb_26860 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Gb_27734 | No alias | Zinc finger protein 10 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
LOC_Os01g04120.1 | No alias | C2H2 zinc finger transcription factor | 0.06 | Archaeplastida | |
LOC_Os01g32920.1 | No alias | C2H2 zinc finger transcription factor | 0.08 | Archaeplastida | |
LOC_Os02g01090.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
LOC_Os02g57550.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
LOC_Os03g05490.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
LOC_Os03g11680.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
LOC_Os03g41110.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
LOC_Os03g57240.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
LOC_Os04g08600.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
LOC_Os04g50070.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
LOC_Os05g14130.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
LOC_Os05g20930.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
LOC_Os07g23450.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
LOC_Os08g44190.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
LOC_Os09g26200.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
LOC_Os09g27320.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
LOC_Os09g38610.1 | No alias | C2H2 zinc finger transcription factor | 0.06 | Archaeplastida | |
LOC_Os11g48000.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
LOC_Os12g42250.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
MA_10430024g0010 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
MA_113057g0020 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_2800g0010 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
MA_357706g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
MA_424g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
MA_48488g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_54742g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
MA_57615g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Pp3c20_10790V3.1 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | Archaeplastida | |
Pp3c23_800V3.1 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | Archaeplastida | |
Pp3c6_19230V3.1 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.02 | Archaeplastida | |
Solyc03g117070.1.1 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
Solyc05g006310.3.1 | No alias | C2H2 zinc finger transcription factor | 0.08 | Archaeplastida | |
Solyc05g009180.1.1 | No alias | C2H2 zinc finger transcription factor | 0.09 | Archaeplastida | |
Solyc05g009380.4.1 | No alias | Zinc finger protein JAGGED OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Solyc06g053720.3.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Solyc08g077000.1.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Solyc09g011120.1.1 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
Solyc09g061870.3.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc09g066250.1.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
Solyc09g089590.1.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Solyc10g078970.1.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
Solyc10g078990.1.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
Solyc10g084910.3.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Solyc11g011890.2.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Zm00001e008019_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Zm00001e009853_P001 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
Zm00001e009854_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
Zm00001e010687_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Zm00001e011910_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Zm00001e012453_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
Zm00001e013845_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e016256_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Zm00001e017009_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Zm00001e020926_P001 | No alias | C2H2 zinc finger transcription factor | 0.06 | Archaeplastida | |
Zm00001e022212_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Zm00001e025746_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Zm00001e030783_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Zm00001e032639_P001 | No alias | C2H2 zinc finger transcription factor | 0.09 | Archaeplastida | |
Zm00001e034219_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
Zm00001e034220_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
Zm00001e034221_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
Zm00001e034883_P001 | No alias | C2H2 zinc finger transcription factor | 0.08 | Archaeplastida | |
Zm00001e036220_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
Zm00001e036816_P001 | No alias | C2H2 zinc finger transcription factor | 0.14 | Archaeplastida | |
Zm00001e037944_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Zm00001e037946_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Zm00001e040612_P001 | No alias | C2H2 zinc finger transcription factor | 0.06 | Archaeplastida | |
Zm00001e040940_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Neighborhood |
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006952 | defense response | IEP | Neighborhood |
BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008172 | S-methyltransferase activity | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Neighborhood |
BP | GO:0009690 | cytokinin metabolic process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010817 | regulation of hormone levels | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
CC | GO:0031012 | extracellular matrix | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Neighborhood |
MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Neighborhood |
BP | GO:0042445 | hormone metabolic process | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Neighborhood |
CC | GO:0044421 | extracellular region part | IEP | Neighborhood |
MF | GO:0045735 | nutrient reservoir activity | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |